BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G07SP1|AL429950
(518 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 212 8e-55
>3x_Contig1619
Length = 7770
Score = 212 bits (95), Expect = 8e-55
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gataatcataataatctcataaatttataccagccctcatatgttatatgagggctggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 gataatcataataatctcataaatttataccagccctcatatgttatatgagggctggta 3114
Query: 61 tatataaataattatatattctatttttatataat 95
|||||||||||||||||||||||||||||||||||
Sbjct: 3115 tatataaataattatatattctatttttatataat 3149
Score = 116 bits (52), Expect = 5e-26
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 148 ccgcwaycatgctatggtcgcggggatawttataaatattcatctwawaatatddtwtwt 207
|||| | ||||||||||||||||||||| |||||||||||||||| | ||||| | | |
Sbjct: 3202 ccgcaaccatgctatggtcgcggggataattataaatattcatctaaaaatataatatat 3261
Query: 208 athatgtwatttat 221
|| |||| ||||||
Sbjct: 3262 ataatgtaatttat 3275
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.54 0.734 1.44
Gapped
Lambda K H
1.54 0.734 1.44
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7502
Number of Sequences: 1807
Number of extensions: 7502
Number of successful extensions: 365
Number of sequences better than 1.0e-20: 1
length of query: 518
length of database: 10,358,551
effective HSP length: 15
effective length of query: 503
effective length of database: 10,331,446
effective search space: 5196717338
effective search space used: 5196717338
T: 0
A: 40
X1: 5 (11.1 bits)
X2: 13 (29.0 bits)
S1: 11 (24.9 bits)
S2: 45 (100.7 bits)